Hello, I'm đź‘‹

Mohsen Motie-Shirazi

Research Scientist • Machine Learning • Biomedical Engineering

Turning complex data into intelligent solutions

About Me

I'm an Applied Research Scientist specializing in biomedical engineering, machine learning, and signal processing. My work spans the full stack—from experimental design and data engineering to modeling, validation, and deployment—focused on building reliable, interpretable systems that translate complex physiological signals into actionable insight.

I work extensively with real-world biomedical data, including low-cost Doppler ultrasound, acoustic and voice signals, ECG, EEG, EHR, and other clinical measurements collected in noisy, uncontrolled environments. I collaborate closely with domain experts and product teams to ensure that methods are statistically rigorous, computationally efficient, clinically grounded, and deployable in practice.

I hold a Ph.D. in Mechanical Engineering with a focus on biomedical applications and thrive on problems where principled modeling, clean pipelines, and careful evaluation lead to measurable impact on patient care.

Research Areas

Biomedical Engineering, Machine Learning, Signal Processing, Physiological Signal Analysis, Clinical Decision Support

Publications

Multiple peer-reviewed publications in leading journals and conferences. View my Google Scholar profile for complete list.

Education

Ph.D. in Mechanical Engineering with a focus on biomedical applications

Research Areas & Expertise

Biomedical Engineering

Vocal Fold Biomechanics Fetal Monitoring Medical Imaging Signal Processing

Machine Learning & AI

Deep Learning Edge AI Computer Vision Neural Sequence Modeling

Computational Methods

Finite Element Analysis Bayesian Inference Fluid Dynamics Numerical Simulation

Technologies

Python TensorFlow/PyTorch Android Development MATLAB

Research Projects

From Doppler to Decision: On-Device Fetal Monitoring System

From Doppler to Decision: On-Device Fetal Monitoring in the Real World

A field-deployable fetal monitoring system built around a low-cost (~$15) handheld Doppler connected to a smartphone, where we have developed a full on-device pipeline that converts raw one-dimensional audio into clinically meaningful information in real time. The pipeline combines signal processing (filtering, normalization, artifact suppression, and signal-saturation detection) with deep learning models for fetal heart rate tracking, signal quality indices that guide probe positioning, and gestational-age estimation using hierarchical sequence modeling; a mobile computer-vision component uses real-time object detection and digit recognition to transcribe bedside blood-pressure displays into structured data. All inference runs inside an Android application with lightweight, quantized models to deliver sub-second, on-screen feedback that reduces unusable windows, stabilizes fetal heart rate and gestational-age estimates in noisy, real-world conditions, and packages results for seamless handoff to clinical workflows—bringing reliable point-of-care analytics to low-resource settings.

Deep Learning Signal Processing Edge AI Mobile Computing Computer Vision Point-of-Care
From Bench Models to Clinical Insight: Physics-Informed Voice Modeling

From Bench Models to Clinical Insight: Physics-Informed Voice Modeling

Built from the bench up, this program begins with physical vocal-fold models and controlled airflow, collecting direct intraglottal and subglottal pressures, acoustic recordings, and high-speed video under reproducible conditions. On top of these grounded measurements, we have developed physics-informed models—contact mechanics for collision pressure and finite-element inversion for tissue properties—to generate interpretable, pathology-relevant features such as spatiotemporal opening and closure patterns, symmetry and energy measures, and cumulative collision-pressure "dose." These features are then fed into machine learning models for classification, enabling differentiation of common lesions (for example, nodules, polyps, and posterior glottal insufficiency). The result is a coherent chain—physical modeling → multimodal measurement → physics-informed features → machine-learning classification—that supports diagnosis, therapy planning, and surgical decision-making.

Physics-Informed Modeling Biomechanics Machine Learning Clinical Decision Support Multimodal Measurement
ECG Analysis

ECG Image Digitization & Analysis

Creation of comprehensive ECG image databases with real-world imaging and scanning artifacts to enable computerized ECG image digitization and analysis. This project provides foundational datasets for developing automated ECG analysis systems.

ECG Analysis Image Processing Medical Imaging
View Related Publications →
Computational Modeling

Computational Modeling & Finite Element Analysis

Development of advanced computational models including 2D finite element models for vocal fold material property inference, Bayesian inference frameworks, and numerical simulations for biomedical applications such as irrigant penetration in dentinal microtubules.

Finite Element Bayesian Inference Computational
View Related Publications →

Publications

For a complete and up-to-date list of my publications, citations, and research metrics, please visit my Google Scholar profile.

2025

Next-Generation Fetal Heart Monitoring: Leveraging Neural Sequential Modeling for Ultrasound Analysis

A Rafiei, M Motie-Shirazi, R Sameni, GD Clifford, N Katebi

IEEE Transactions on Biomedical Engineering

2025

Real-Time Quality Feedback on Doppler Data for Community Midwives using Edge-AI

M Motie-Shirazi, S Nikookar, M Ahmad, A Rafiei, R Sameni, P Rohloff, ...

Machine Learning: Health

2025

Edge AI for Real-time Fetal Assessment in Rural Guatemala

N Katebi, M Ahmad, M Motie-Shirazi, D Phan, E Kolesnikova, S Nikookar, ...

Demo Track, ML4H

2024

ECG-image-database: A dataset of ECG images with real-world imaging and scanning artifacts; a foundation for computerized ECG image digitization and analysis

MA Reyna, J Weigle, Z Koscova, K Campbell, KK Shivashankara, M Motie-Shirazi, ...

arXiv preprint arXiv:2409.16612

2023

Point-of-Care Real-Time Signal Quality for Fetal Doppler Ultrasound Using a Deep Learning Approach

M Motie-Shirazi, R Sameni, P Rohloff, N Katebi, GD Clifford

Findings Track, ML4H

2023

Effect of nodule size and stiffness on phonation threshold and collision pressures in a synthetic hemilaryngeal vocal fold model

M Motie-Shirazi, M Zañartu, SD Peterson, DD Mehta, RE Hillman, ...

The Journal of the Acoustical Society of America, 153(1), 654-664

2022

An Investigation of Normal and Pathological Collision Mechanics in Synthetic Vocal Fold Models

M Motie-Shirazi

Ph.D. Dissertation, Department of Mechanical & Aerospace Engineering, Clarkson University

2022

Collision pressure and dissipated power dose in a self-oscillating silicone vocal fold model with a posterior glottal opening

M Motie-Shirazi, M Zañartu, SD Peterson, DD Mehta, RE Hillman, ...

Journal of Speech, Language, and Hearing Research, 65(8), 2829-2845

2022

Experimental validation of repeated/pa/gestures for estimation of subglottal pressure with incomplete glottal closure

M Motie-Shirazi, M Zañartu, SD Peterson, BD Erath

75th Annual Meeting of the Division of Fluid Dynamics

2022

Success rate and repeatability of silicone vocal fold model fabrication

M Motie-Shirazi, Q Li, B Erath

Bulletin of the American Physical Society, 67

2021

Vocal fold dynamics in a synthetic self-oscillating model: Intraglottal aerodynamic pressure and energy

M Motie-Shirazi, M Zañartu, SD Peterson, BD Erath

The Journal of the Acoustical Society of America, 150(2), 1332-1345

2021

Vocal fold dynamics in a synthetic self-oscillating model: Contact pressure and dissipated-energy dose

M Motie-Shirazi, M Zañartu, SD Peterson, BD Erath

The Journal of the Acoustical Society of America, 150(1), 478-489

2021

Fluid-structure energy exchange during phonation: investigation of dissipated collision energy by direct measurement of internal tissue velocity

M Motie-Shirazi, M Zañartu, S Peterson, B Erath

APS Division of Fluid Dynamics Meeting Abstracts, H10.003

2020

Intraglottal aerodynamic pressure and energy transfer in a self-oscillating synthetic model of the vocal folds

M Motie-Shirazi, M Zañartu, SD Peterson, BD Erath

medRxiv, 2020.11.20.20235911

2019

Toward development of a vocal fold contact pressure probe: Sensor characterization and validation using synthetic vocal fold models

M Motie-Shirazi, M Zañartu, SD Peterson, DD Mehta, JB Kobler, ...

Applied Sciences, 9(15), 3002

2019

Bayesian inference of vocal fold material properties from glottal area waveforms using a 2D finite element model

PJ Hadwin, M Motie-Shirazi, BD Erath, SD Peterson

Applied Sciences, 9(13), 2735

2019

Estimating vocal fold contact pressure from raw laryngeal high-speed videoendoscopy using a Hertz contact model

ME Díaz-Cádiz, SD Peterson, GE Galindo, VM Espinoza, M Motie-Shirazi, ...

Applied Sciences, 9(11), 2384

2019

Toward development of a vocal fold contact pressure probe: Bench-top validation of a dual-sensor probe using excised human larynx models

DD Mehta, JB Kobler, SM Zeitels, M Zañartu, BD Erath, M Motie-Shirazi, ...

Applied Sciences, 9(20), 4360

2017

Numerical and analytical investigation of irrigant penetration into dentinal microtubules

MM Shirazi, O Abouali, H Emdad, M Nabavizadeh, H Mirhadi, G Ahmadi

Computers in Biology and Medicine, 89, 1-17

View All Publications on Google Scholar